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\n \n\n \n \n Endo, T., Ueno, K., Yonezawa, K., Mineta, K., Hotta, K., Satou, Y., Yamada, L., Ogasawara, M., Takahashi, H., Nakajima, A., Nakachi, M., Nomura, M., Yaguchi, J., Sasakura, Y., Yamasaki, C., Sera, M., Yoshizawa, A. C., Imanishi, T., Taniguchi, H., & Inaba, K.\n\n\n \n \n \n \n \n CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality.\n \n \n \n \n\n\n \n\n\n\n Nucleic Acids Research, 39(Database): D807–D814. January 2011.\n \n\n\n\n
\n\n\n\n \n \n \"CIPROPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{endo_cipro_2011,\n\ttitle = {{CIPRO} 2.5: \\textit{{Ciona} intestinalis} protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality},\n\tvolume = {39},\n\tissn = {0305-1048, 1362-4962},\n\tshorttitle = {{CIPRO} 2.5},\n\turl = {https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkq1144},\n\tdoi = {10.1093/nar/gkq1144},\n\tlanguage = {en},\n\tnumber = {Database},\n\turldate = {2021-07-27},\n\tjournal = {Nucleic Acids Research},\n\tauthor = {Endo, T. and Ueno, K. and Yonezawa, K. and Mineta, K. and Hotta, K. and Satou, Y. and Yamada, L. and Ogasawara, M. and Takahashi, H. and Nakajima, A. and Nakachi, M. and Nomura, M. and Yaguchi, J. and Sasakura, Y. and Yamasaki, C. and Sera, M. and Yoshizawa, A. C. and Imanishi, T. and Taniguchi, H. and Inaba, K.},\n\tmonth = jan,\n\tyear = {2011},\n\tpages = {D807--D814},\n}\n\n
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\n \n\n \n \n Hamada, M., Shimozono, N., Ohta, N., Satou, Y., Horie, T., Kawada, T., Satake, H., Sasakura, Y., & Satoh, N.\n\n\n \n \n \n \n \n Expression of neuropeptide- and hormone-encoding genes in the Ciona intestinalis larval brain.\n \n \n \n \n\n\n \n\n\n\n Developmental Biology, 352(2): 202–214. April 2011.\n \n\n\n\n
\n\n\n\n \n \n \"ExpressionPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{hamada_expression_2011,\n\ttitle = {Expression of neuropeptide- and hormone-encoding genes in the \\textit{{Ciona} intestinalis} larval brain},\n\tvolume = {352},\n\tissn = {00121606},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0012160611000224},\n\tdoi = {10.1016/j.ydbio.2011.01.006},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-27},\n\tjournal = {Developmental Biology},\n\tauthor = {Hamada, Mayuko and Shimozono, Naoki and Ohta, Naoyuki and Satou, Yutaka and Horie, Takeo and Kawada, Tsuyoshi and Satake, Honoo and Sasakura, Yasunori and Satoh, Nori},\n\tmonth = apr,\n\tyear = {2011},\n\tpages = {202--214},\n}\n\n
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\n \n\n \n \n Horie, T., Shinki, R., Ogura, Y., Kusakabe, T. G., Satoh, N., & Sasakura, Y.\n\n\n \n \n \n \n \n Ependymal cells of chordate larvae are stem-like cells that form the adult nervous system.\n \n \n \n \n\n\n \n\n\n\n Nature, 469(7331): 525–528. January 2011.\n \n\n\n\n
\n\n\n\n \n \n \"EpendymalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{horie_ependymal_2011,\n\ttitle = {Ependymal cells of chordate larvae are stem-like cells that form the adult nervous system},\n\tvolume = {469},\n\tissn = {0028-0836, 1476-4687},\n\turl = {http://www.nature.com/articles/nature09631},\n\tdoi = {10.1038/nature09631},\n\tlanguage = {en},\n\tnumber = {7331},\n\turldate = {2021-07-27},\n\tjournal = {Nature},\n\tauthor = {Horie, Takeo and Shinki, Ryoko and Ogura, Yosuke and Kusakabe, Takehiro G. and Satoh, Nori and Sasakura, Yasunori},\n\tmonth = jan,\n\tyear = {2011},\n\tpages = {525--528},\n}\n\n
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\n \n\n \n \n Ogura, Y., Sakaue-Sawano, A., Nakagawa, M., Satoh, N., Miyawaki, A., & Sasakura, Y.\n\n\n \n \n \n \n \n Coordination of mitosis and morphogenesis: role of a prolonged G2 phase during chordate neurulation.\n \n \n \n \n\n\n \n\n\n\n Development, 138(3): 577–587. February 2011.\n \n\n\n\n
\n\n\n\n \n \n \"CoordinationPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{ogura_coordination_2011,\n\ttitle = {Coordination of mitosis and morphogenesis: role of a prolonged {G2} phase during chordate neurulation},\n\tvolume = {138},\n\tissn = {1477-9129, 0950-1991},\n\tshorttitle = {Coordination of mitosis and morphogenesis},\n\turl = {https://journals.biologists.com/dev/article/138/3/577/44842/Coordination-of-mitosis-and-morphogenesis-role-of},\n\tdoi = {10.1242/dev.053132},\n\tabstract = {Chordates undergo a characteristic morphogenetic process during neurulation to form a dorsal hollow neural tube. Neurulation begins with the formation of the neural plate and ends when the left epidermis and right epidermis overlying the neural tube fuse to close the neural fold. During these processes, mitosis and the various morphogenetic movements need to be coordinated. In this study, we investigated the epidermal cell cycle in Ciona intestinalis embryos in vivo using a fluorescent ubiquitination-based cell cycle indicator (Fucci). Epidermal cells of Ciona undergo 11 divisions as the embryos progress from fertilization to the tadpole larval stage. We detected a long G2 phase between the tenth and eleventh cell divisions, during which fusion of the left and right epidermis occurred. Characteristic cell shape change and actin filament regulation were observed during the G2 phase. CDC25 is probably a key regulator of the cell cycle progression of epidermal cells. Artificially shortening this G2 phase by overexpressing CDC25 caused precocious cell division before or during neural tube closure, thereby disrupting the characteristic morphogenetic movement. Delaying the precocious cell division by prolonging the S phase with aphidicolin ameliorated the effects of CDC25. These results suggest that the long interphase during the eleventh epidermal cell cycle is required for neurulation.},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Development},\n\tauthor = {Ogura, Yosuke and Sakaue-Sawano, Asako and Nakagawa, Masashi and Satoh, Nori and Miyawaki, Atsushi and Sasakura, Yasunori},\n\tmonth = feb,\n\tyear = {2011},\n\tpages = {577--587},\n}\n\n
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\n Chordates undergo a characteristic morphogenetic process during neurulation to form a dorsal hollow neural tube. Neurulation begins with the formation of the neural plate and ends when the left epidermis and right epidermis overlying the neural tube fuse to close the neural fold. During these processes, mitosis and the various morphogenetic movements need to be coordinated. In this study, we investigated the epidermal cell cycle in Ciona intestinalis embryos in vivo using a fluorescent ubiquitination-based cell cycle indicator (Fucci). Epidermal cells of Ciona undergo 11 divisions as the embryos progress from fertilization to the tadpole larval stage. We detected a long G2 phase between the tenth and eleventh cell divisions, during which fusion of the left and right epidermis occurred. Characteristic cell shape change and actin filament regulation were observed during the G2 phase. CDC25 is probably a key regulator of the cell cycle progression of epidermal cells. Artificially shortening this G2 phase by overexpressing CDC25 caused precocious cell division before or during neural tube closure, thereby disrupting the characteristic morphogenetic movement. Delaying the precocious cell division by prolonging the S phase with aphidicolin ameliorated the effects of CDC25. These results suggest that the long interphase during the eleventh epidermal cell cycle is required for neurulation.\n
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\n \n\n \n \n Yoshiyama-Yanagawa, T., Enya, S., Shimada-Niwa, Y., Yaguchi, S., Haramoto, Y., Matsuya, T., Shiomi, K., Sasakura, Y., Takahashi, S., Asashima, M., Kataoka, H., & Niwa, R.\n\n\n \n \n \n \n \n The Conserved Rieske Oxygenase DAF-36/Neverland Is a Novel Cholesterol-metabolizing Enzyme.\n \n \n \n \n\n\n \n\n\n\n Journal of Biological Chemistry, 286(29): 25756–25762. July 2011.\n \n\n\n\n
\n\n\n\n \n \n \"ThePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 11 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yoshiyama-yanagawa_conserved_2011,\n\ttitle = {The {Conserved} {Rieske} {Oxygenase} {DAF}-36/{Neverland} {Is} a {Novel} {Cholesterol}-metabolizing {Enzyme}},\n\tvolume = {286},\n\tissn = {00219258},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0021925819485657},\n\tdoi = {10.1074/jbc.M111.244384},\n\tlanguage = {en},\n\tnumber = {29},\n\turldate = {2021-07-27},\n\tjournal = {Journal of Biological Chemistry},\n\tauthor = {Yoshiyama-Yanagawa, Takuji and Enya, Sora and Shimada-Niwa, Yuko and Yaguchi, Shunsuke and Haramoto, Yoshikazu and Matsuya, Takeshi and Shiomi, Kensuke and Sasakura, Yasunori and Takahashi, Shuji and Asashima, Makoto and Kataoka, Hiroshi and Niwa, Ryusuke},\n\tmonth = jul,\n\tyear = {2011},\n\tpages = {25756--25762},\n}\n\n
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